The Menze group publishes DeepVesselNet, a deep learning approach to perform vessel segmentation, centerline prediction, and bifurcation detection tasks

DeepVesselNet: Vessel Segmentation, Centerline Prediction, and Bifurcation Detection in 3-D Angiographic Volumes

See Tetteh et al, Front. Neurosci.

The code can be found on GitHub: Tetteh, 2019a

A ready-to-use implementation is available as companion material to the publication “Machine learning analysis of whole mouse brain vasculature”Todorov et al., 2020

Fig. 1 Tetteh 2020
Fig.1: An overview of the three main tasks tackled in this paper. © 2020 The Author(s)