Michael Krauthammer
Publications in Zurich Open Repository and Archive (ZORA)
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Publications
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Publisher Correction: Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature Biotechnology, 43(5):822.
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Machine learning prediction of prime editing efficiency across diverse chromatin contexts. Nature Biotechnology, 43(5):712-719.
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Strategies for Interdisciplinary Human Gene Editing Research: Insights from a Swiss Project. The CRISPR journal:1-19.
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Effective genome editing with an enhanced ISDra2 TnpB system and deep learning-predicted ωRNAs. Nature Methods, 21(11):2084-2093.
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COL10A1 expression distinguishes a subset of cancer-associated fibroblasts present in the stroma of high-risk basal cell carcinoma. British Journal of Dermatology, 191(5):775-790.
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Longitudinal cell-free DNA characterization by low-coverage whole-genome sequencing in patients undergoing high-dose radiotherapy. Radiotherapy and Oncology, 197:110364.
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Innate acting memory Th1 cells modulate heterologous diseases. Proceedings of the National Academy of Sciences of the United States of America, 121(24):e2312837121.
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Explainable deep learning for disease activity prediction in chronic inflammatory joint diseases. PLOS Digital Health, 3(6):e0000422.
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Simple Contrastive Representation Learning for Time Series Forecasting. In: ICASSP 2024 - 2024 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), Seoul, Korea, Republic of, 14 April 2024 - 19 April 2024. Institute of Electrical and Electronics Engineers, 6005-6009.
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Former smoking, but not active smoking, is associated with delirium in postoperative ICU patients: a matched case-control study. Frontiers in Psychiatry, 15:1347071.
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Fragmentstein—facilitating data reuse for cell-free DNA fragment analysis. Bioinformatics, 40(1):btae017.
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Exploring the Latest Highlights in Medical Natural Language Processing across Multiple Languages: A Survey. Yearbook of medical informatics, 32(01):230-243.
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Predicting prime editing efficiency and product purity by deep learning. Nature Biotechnology, 41(8):1151-1159.
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Explainable Deep Learning for Disease Activity Prediction in Chronic Inflammatory Joint Diseases. In: ICML 3rd Workshop on Interpretable Machine Learning in Healthcare (IMLH), Honolulu, Hawaii, 28 July 2023, 1-8.
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ROS Induction Targets Persister Cancer Cells with Low Metabolic Activity in NRAS-Mutated Melanoma. Cancer Research, 83(7):1128-1146.
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Disfluent Cues for Enhanced Speech Understanding in Large Language Models. In: Empirical Methods in Natural Language Processing (EMNLP), Singapore, 2023, 3676-3684.
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Position paper: Artificial Intelligence in Medicine – Objectives and Recommendations for the Responsible Use of Digital Twins. Zürich: UZH – Digital Society Initiative (DSI).
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Live slow-frozen human tumor tissues viable for 2D, 3D, ex vivo cultures and single-cell RNAseq. Communications Biology, 5:1144.
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ROS induction as a strategy to target persister cancer cells with low metabolic activity in NRAS mutated melanoma. bioRxiv 512839, Cold Spring Harbor Laboratory.