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DQBM Publications
Bernd Bodenmiller
Bernd Bodenmiller
Publications in Zurich Open Repository and Archive (ZORA)
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Publications
Brusniak, Mi-Youn; Bodenmiller, Bernd; Campbell, David; Cooke, Kelly; Eddes, James; Garbutt, Andrew; Lau, Hollis; Letarte, Simon; Mueller, Lukas N; Sharma, Vagisha; Vitek, Olga; Zhang, Ning; Aebersold, Ruedi; Watts, Julian D (2008).
Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
BMC Bioinformatics, 9:542.
Bodenmiller, B; Campbell, D; Gerrits, B; Lam, H; Jovanovic, M; Picotti, P; Schlapbach, R; Aebersold, R (2008).
PhosphoPep--a database of protein phosphorylation sites in model organisms.
Nature Biotechnology, 26(12):1339-1340.
Bodenmiller, Bernd; Mueller, Lukas N; Mueller, Markus; Domon, Bruno; Aebersold, Ruedi (2007).
Reproducible isolation of distinct, overlapping segments of the phosphoproteome.
Nature Methods, 4(3):231-237.
Bodenmiller, Bernd; Mueller, Lukas N; Pedrioli, Patrick G A; Pflieger, Delphine; Jünger, Martin A; Eng, Jimmy K; Aebersold, Ruedi; Tao, W Andy (2007).
An integrated chemical, mass spectrometric and computational strategy for (quantitative) phosphoproteomics: application to Drosophila melanogaster Kc167 cells.
Molecular Biosystems, 3(4):275-286.
Mueller, Lukas N; Rinner, Oliver; Schmidt, Alexander; Letarte, Simon; Bodenmiller, Bernd; Brusniak, Mi-Youn; Vitek, Olga; Aebersold, Ruedi; Müller, Markus (2007).
SuperHirn - a novel tool for high resolution LC-MS-based peptide/protein profiling.
Proteomics, 7(19):3470-3480.
Bodenmiller, B; Malmstrom, J; Gerrits, B; Campbell, D; Lam, H; Schmidt, A; Rinner, O; Mueller, L N; Shannon, P T; Pedrioli, P G; Panse, C; Lee, H K; Schlapbach, R; Aebersold, R (2007).
PhosphoPep--a phosphoproteome resource for systems biology research in Drosophila Kc167 cells.
Molecular Systems Biology, 3:139.
Tao, W Andy; Wollscheid, Bernd; O'Brien, Robert; Eng, Jimmy K; Li, Xiao-jun; Bodenmiller, Bernd; Watts, Julian D; Hood, Leroy; Aebersold, Ruedi (2005).
Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry.
Nature Methods, 2(8):591-598.
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